PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016440711.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 444aa    MW: 48516.1 Da    PI: 9.6469
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016440711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-05197219223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      Cp Cg++F+  ++L++H+ + H
  XP_016440711.1 197 ACPECGEVFPKIESLEHHQAVrH 219
                     6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.016196224IPR007087Zinc finger, C2H2
PROSITE patternPS000280196219IPR007087Zinc finger, C2H2
SuperFamilySSF563995.56E-21221440No hitNo description
Gene3DG3DSA:3.90.228.102.7E-8222440IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MKKRGSSSSS TIVLLFHFLA LLFMALLTFT QEISENTQKQ PSKRRKKQQI KQQKEKQKQP  60
SSWDQFKNLL TCKQIENSAV HDPASKNSKL GSCSSICSFR DVVHGNTRVV HRADNSPESS  120
SLGQETRLLS KNKTSHHGQS SSSRSLARSN GSASSTYTTT SSSSSRGMQF RKLSGCYECH  180
MIVDPSRYPL PRSTICACPE CGEVFPKIES LEHHQAVRHA VSELGPEDSS RNIVEIIFKS  240
SWLKKDNPIC KIERILKVHN TKRTIQRFED CRDAVKIHAV ATGKKNPRCA ADGNELLRFY  300
CTSLTCSLGA RGSSSLCGSL PSCGVCSLIR HGFQGSKTSG VRTIASSGRA HDCLGGGTAK  360
RRAMLVCRVI AGRIKQTAKD VAASPTTEEE TCSGSGSGLL TNGSAIYDSV AGYAGIYSNL  420
EELYVFNPRA ILPCFVVIYE ALES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016440711.10.0PREDICTED: uncharacterized protein LOC107766445
TrEMBLA0A0V0I9M90.0A0A0V0I9M9_SOLCH; Putative C2H2-like zinc finger protein-like
STRINGSolyc04g081370.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-150C2H2-like zinc finger protein